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| virtual size_t | size () const |
| | returns the number of spectra More...
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| virtual const SpectrumIdentity & | spectrumIdentity (size_t index) const |
| | access to a spectrum index More...
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| virtual size_t | find (const string &id) const |
| | find id in the spectrum index (returns size() on failure) More...
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| virtual SpectrumPtr | spectrum (size_t index, bool getBinaryData) const |
| | retrieve a spectrum by index More...
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| virtual SpectrumPtr | spectrum (size_t index, DetailLevel detailLevel) const |
| | retrieve a spectrum by index More...
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| virtual SpectrumPtr | spectrum (size_t index, bool getBinaryData, const pwiz::util::IntegerSet &msLevelsToCentroid) const |
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| virtual SpectrumPtr | spectrum (size_t index, DetailLevel detailLevel, const pwiz::util::IntegerSet &msLevelsToCentroid) const |
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| virtual pwiz::analysis::Spectrum3DPtr | spectrum3d (double scanStartTime, const boost::icl::interval_set< double > &driftTimeRanges) const |
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| virtual bool | hasIonMobility () const |
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| virtual bool | canConvertIonMobilityAndCCS () const |
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| virtual double | ionMobilityToCCS (double driftTime, double mz, int charge) const |
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| virtual double | ccsToIonMobility (double ccs, double mz, int charge) const |
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| | SpectrumListBase () |
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| virtual const boost::shared_ptr< const DataProcessing > | dataProcessingPtr () const |
| | implementation of SpectrumList More...
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| virtual void | setDataProcessingPtr (DataProcessingPtr dp) |
| | set DataProcessing More...
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| virtual void | warn_once (const char *msg) const |
| | issues a warning once per SpectrumList instance (based on string hash) More...
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| virtual bool | empty () const |
| | returns true iff (size() == 0) and (dataProcessingPtr.get() == NULL) More...
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| virtual size_t | findAbbreviated (const std::string &abbreviatedId, char delimiter='.') const |
| | find an abbreviated id (e.g. "1.1.123.2" for "sample=1 period=1 cycle=123 experiment=2") in the spectrum index (returns size() on failure) More...
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| virtual IndexList | findNameValue (const std::string &name, const std::string &value) const |
| | find all spectrum indexes with specified name/value pair More...
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| virtual IndexList | findSpotID (const std::string &spotID) const |
| | find all spectrum indexes with spotID (returns empty vector on failure) More...
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| virtual SpectrumPtr | spectrum (const SpectrumPtr &seed, bool getBinaryData) const |
| | get a copy of the seed spectrum, optionally with its binary data populated this is useful for formats like mzML that can delay loading of binary data More...
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| virtual | ~SpectrumList () |
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Definition at line 51 of file SpectrumList_Agilent.hpp.